It's in the section I quoted:
On the other hand, taken as a whole, the universe does seem to point beyond itself. Whatever could possibly undergird the existence of the universe, including your existence, Gentle Reader, is one aspect of what “god” refers to. Second, that Whatever cannot itself need the universe in order to exist itself. Third, if the Whatever is, then the universe and all that is part of it is a creation. — Whalon'
God is supposedly the thing which undergirds existence.
Those who say they do not believe in God often give lack of evidence for their unbelief. This is a confusion of knowledge and faith . It is also an error of logic — absence of evidence is not evidence of absence. There cannot be any empirical evidence of the existence of God, for God does not exist. — Whalon'
Here he's still treating like the presence of absence of evidence has something to do with God. Supposedly, the atheists are wrong for citing the absence of evidence for God as a reason to say God doesn't exist. Whalon is still thinking of God as an existing state here because otherwise the atheist arguments wouldn't have any bearing on the case.
Logically, the atheist's would be correct (the absence of evidence for an evidential claim - the existing God) and Whalon would
agree, for they were talking about, the super being zipping around the universe is shown absent by evidence (for the world we've encountered at least). Then Whalon would go on to (correctly) point out these correctly given atheist arguments had no impact on the God he was talking about.
What we take for granted as “real” is a construct of our brain, senses and nervous system. Beyond the discoveries of gestalt psychology that show clearly that our “picture” of reality is easily distorted, there are the longer-term observations of philosophers of knowledge, the epistemologists. Perhaps the most interesting ability of our mind is to grasp that it is generated by the brain, like a magnetic field results from an electric current passing through a piece of iron. The mind is no more the brain than the field is the iron, though the one depends upon the other. Yet we can, with some effort, also fold again on our selves to catch our minds in the act of thinking. Perceiving the illusion of time passing is one example. Believing that absence of evidence is evidence of absence, or that because something happens regularly, it will always happen that way, are other patterns that we can catch our minds doing. — Whalon
This is also about empirical states. Here he talks about when we get fooled about the existing world by our brains and desires. In God, we are not talking about whether we have missed information about existing states. God is outside of such changes, illusions and surprises.
What we call god (all human languages have a word for it) is something we infer from the fact of existence. — Whalon
This is true. The problem is we tend to literalise it. We infer meaning with respect to existing states around us constantly, but we have a tendency to equivocate those infinite with states themselves.
Life is perhaps the biggest one. Power is another one. We infer the infinite meaning of are action (death, life, domination, rescue, creation) and assume it must mean an infinite existing state, particularly in the context of what we desire. Super beings who give us are lives and are immortal in one sense or another. Most often we begin by suggesting these infinite as existing because that's how we encounter the meanings-- in how we act and are acted upon by the world. Pantheons. Spirits. Magic rituals. Miracles.
Then, when someone starts paying attention to the logic of God, we tend to wind this back to a presence which is not of this world. The hidden realm which never manifests to us but nevertheless causes us and allows our existence. We get the "invisible God" who acts without acting because we still think of God in terms a presence in the world, even though we've begun to realise this doesn't make sense. We detach God from our world, but not from existence.
Eventually, we get to a point where we realise God is not of our world but, more importantly,
that any world is not of God. We may infer the infinite from existence, but the infinite is never of existence, even as an "undergrid." Indeed, the infinite has
nothing do to the presence of existing-- states are define solely in themselves rather than by some outside force.
Whalon is caught in between the last two understandings of God. On the one hand he realises God cannot be part of existence, but on the other he is still stuck thinking of God in terms of existence, for else "faith" (in the "God is true sense" ) would be irrelevant.
If Whalon were to fully commit to the argument God did not exist, he would be making an atheistic one. His belief would be reduced to nothing more than a tradition which gave him understanding of the infinite. While I suspect he might not be too bothered the general idea of tradition rather than existing state (the whole more than one path to the "infinite" ), it gets a bit prickly in the context of individual belief because people usually take up or hold a belief (not just theistic ones either; science promises knowledge and control of the world, atheism promises a world with out many of those abhorrent supermen running around in the sky, etc.,etc.) because of something they've been promised.
To assert all those promises were not really true (existing) takes a lot, particularly when undoes the attractiveness of the tradition-- "God will rescue you from Hell" or "God will cure your illness" is a certain type of compelling argument one cannot make by saying: "This is my tradition and my way of grasping the eternal." It basically
secular in fact: "Well, this is my way but there are others you may find." "Faith" is reduced to nothing more than a finite tradition, something great, fun, soothing, exciting or wise for the individual, but nothing more profound and grandiose.